About ENIGMA-Epilepsy | Secondary Projects | Protocols | Join ENIGMA-Epilepsy | Meetings & Minutes
There are two ongoing ENIGMA-Epilepsy projects: (i) ENIGMA-Epilepsy VOLUMETRICS and (ii) ENIGMA-Epilepsy DTI. Image processing protocols for each project can be found below.
- Step 1: Subcortical volume extraction and visual inspection
- Step 2: Cortical volume extraction
- Step 3: Steps for Quality Checking of Cortical Volume Outputs
- Step 4: Get population summary statistics of the cortical traits and related histograms
- Step 5: Formatting covariate files
- Step 1: Preprocessing
- Step 2: Skeletonization (start here if you have already preprocessed your data)
- Step 3: Check FA registrations and make sure skeletons are correct
- Step 4: ROI extraction from FA images
*For a comprehensive overview of the ENIGMA DTI protocol, please refer to this helpful guide compiled by Dr. Neda Jahanshad: http://enigma.ini.usc.edu/protocols/dti-protocols/